賀 綦,孫嬰寧,李 輝*,王啟貴
(1.農(nóng)業(yè)部雞遺傳育種重點(diǎn)實(shí)驗(yàn)室,哈爾濱 150030; 2.黑龍江省普通高等學(xué)校動(dòng)物遺傳育種與繁殖重點(diǎn)實(shí)驗(yàn)室,哈爾濱 150030; 3.東北農(nóng)業(yè)大學(xué)動(dòng)物科學(xué)技術(shù)學(xué)院,哈爾濱 150030; 4.重慶市畜牧科學(xué)院,重慶 402460)
雞L-FABP啟動(dòng)子區(qū)C/EBPα結(jié)合位點(diǎn)的定點(diǎn)突變分析
賀 綦1,2,3,孫嬰寧1,2,3,李 輝1,2,3*,王啟貴1,2,4*
(1.農(nóng)業(yè)部雞遺傳育種重點(diǎn)實(shí)驗(yàn)室,哈爾濱 150030; 2.黑龍江省普通高等學(xué)校動(dòng)物遺傳育種與繁殖重點(diǎn)實(shí)驗(yàn)室,哈爾濱 150030; 3.東北農(nóng)業(yè)大學(xué)動(dòng)物科學(xué)技術(shù)學(xué)院,哈爾濱 150030; 4.重慶市畜牧科學(xué)院,重慶 402460)
為進(jìn)一步分析L-FABP啟動(dòng)子區(qū)域中的C/EBPα結(jié)合位點(diǎn)以確定其在L-FABP轉(zhuǎn)錄中的調(diào)控作用。本研究采用定點(diǎn)突變方法將L-FABP啟動(dòng)子區(qū)域中的C/EBPα結(jié)合位點(diǎn)進(jìn)行有效突變。結(jié)果顯示,C/EBPα外源過表達(dá)可以抑制L-FABP啟動(dòng)子活性,突變L-FABP啟動(dòng)子區(qū)域中C/EBPα結(jié)合位點(diǎn)后L-FABP的啟動(dòng)子活性明顯升高。這些結(jié)果表明,雞L-FABP基因受到C/EBPα基因負(fù)調(diào)控作用,且C/EBPα很可能通過與該位點(diǎn)結(jié)合參與L-FABP的轉(zhuǎn)錄調(diào)控,為進(jìn)一步研究C/EBPα在L-FABP基因轉(zhuǎn)錄調(diào)控中的作用提供重要依據(jù)。
雞;L-FABP基因;啟動(dòng)子;定點(diǎn)突變;C/EBPα基因
肝型脂肪酸結(jié)合蛋白(Liver-type fatty acid binding protein,L-FABP,F(xiàn)ABP1)屬于脂肪酸結(jié)合蛋白(Fatty acid binding protein,F(xiàn)ABP)家族的成員之一,是一組低分子量(14~15 ku左右)可以結(jié)合長(zhǎng)鏈脂肪酸的高保守性胞質(zhì)蛋白。目前,對(duì)L-FABP的功能研究主要集中在人與小鼠上[1-2]。研究發(fā)現(xiàn),L-FABP與不飽和脂肪酸的協(xié)同作用可有效促進(jìn)細(xì)胞的生長(zhǎng)和分化[2]。F.Schroeder等[3]研究發(fā)現(xiàn),L-FABP基因的表達(dá)與胚胎干細(xì)胞的增殖分化密切相關(guān)。E.P.Newberry等[4]利用基因剔除模型研究顯示,在長(zhǎng)期禁食狀態(tài)下,L-FABP基因剔除的小鼠肝對(duì)脂肪酸的攝入量少于野生型。
雞L-FABP基因只在肝和小腸中表達(dá)[5],與哺乳動(dòng)物L(fēng)-FABP蛋白結(jié)構(gòu)相似[6]。已經(jīng)研究證實(shí),PPAR元件、甾族調(diào)節(jié)元件SRE、C/EBPα和AP1等是人L-FABP基因啟動(dòng)子的重要順式作用元件[7]。C/EBPα基因是第1個(gè)被證明在脂肪細(xì)胞分化過程中起到重要作用的轉(zhuǎn)錄因子。通過在3T3-Ll前脂肪細(xì)胞中研究發(fā)現(xiàn)脂肪細(xì)胞的分化過程中必須要有C/EBPα。在小鼠體內(nèi)將C/EBPα基因干擾,發(fā)現(xiàn)小鼠的白色脂肪組織發(fā)育停滯[8]。本研究前期對(duì)雞L-FABP啟動(dòng)子進(jìn)行鑒定與分析,推測(cè)其啟動(dòng)子區(qū)存在1個(gè)C/EBPα結(jié)合位點(diǎn),受到C/EBPα基因負(fù)調(diào)控作用[9]。
為進(jìn)一步分析L-FABP啟動(dòng)子區(qū)域中C/EBPα結(jié)合位點(diǎn)的真實(shí)性和確切位置,本研究采用定點(diǎn)突變的方法對(duì)L-FABP啟動(dòng)子區(qū)域中的C/EBPα結(jié)合位點(diǎn)進(jìn)行分析,為闡明C/EBPα在L-FABP基因轉(zhuǎn)錄調(diào)控中的作用奠定了基礎(chǔ)。
1.1 試驗(yàn)材料
DMEM高糖培養(yǎng)基、Opti-MEM 培養(yǎng)基、胎牛血清購(gòu)自Gibco公司;熒光素酶報(bào)告基因檢測(cè)試劑盒(Dual-Luciferase?Reporter Assay System)、螢光素酶報(bào)告基因載體(pGL3-basic vector)、海腎熒光素酶報(bào)告基因載體(pRL-TK vector)購(gòu)自Promega公司;質(zhì)?;厥赵噭┖匈?gòu)自O(shè)miga公司;轉(zhuǎn)染試劑LipofectamineTM2000購(gòu)自Invitrogen公司;Fast Mutagenesis System購(gòu)自北京全式金生物技術(shù)有限公司;C/EBPα真核表達(dá)載體和L-FABP(-2076/-20)質(zhì)粒由本實(shí)驗(yàn)室保存;人肝癌細(xì)胞系(HEGP2)由東北農(nóng)業(yè)大學(xué)生命學(xué)院惠贈(zèng)。
1.2 試驗(yàn)方法
1.2.1 生物信息學(xué)分析 采用Mulan和TFSEARCH 軟件對(duì)L-FABP(-2 076/-20)啟動(dòng)子區(qū)進(jìn)行轉(zhuǎn)錄因子結(jié)合位點(diǎn)的預(yù)測(cè)分析。
1.2.2 定點(diǎn)突變重組體的構(gòu)建 根據(jù)生物信息學(xué)分析結(jié)果對(duì)L-FABP啟動(dòng)子區(qū)域的C/EBPα結(jié)合位點(diǎn)進(jìn)行定點(diǎn)突變,設(shè)計(jì)C/EBPα結(jié)合位點(diǎn)突變引物并命名為L(zhǎng)-FABP-F-mC/EBPα和L-FABP-R-mC/EBPα(表1)。以pGL3-L-FABP(-2 076/-20)質(zhì)粒為模板構(gòu)建突變重組體L-FABP-mC/EBPα。定點(diǎn)突變參照Fast Mutagenesis System試劑說明書操作。PCR反應(yīng)條件:95 ℃預(yù)變性5 min;然后95 ℃ 20 s,55 ℃ 20 s,72 ℃ 3 min,28個(gè)循環(huán);72 ℃延伸5 min。
1.2.3 人肝癌細(xì)胞系細(xì)胞(HEGP2)的培養(yǎng)與轉(zhuǎn)染 人肝癌細(xì)胞系(HEPG2)用含有濃度為100 U·mL-1青霉素和鏈霉素、10%胎牛血清的DMEM高糖培養(yǎng)基;在37 ℃,5% CO2條件下培養(yǎng);0.25%胰酶消化液消化;2 d傳代一次;細(xì)胞的轉(zhuǎn)染使用LipofectamineTM2000轉(zhuǎn)染試劑,按照試劑說明書進(jìn)行操作。
表1 構(gòu)建啟動(dòng)子突變體所用引物序列
Table 1 Primers used for promoter mutation
引物名稱Primername引物序列(5′?3′)SequencesofprimerL?FABP?F?mC/EBPαCTGAGATTTGTCCGCATGCTCCCAATTGL?FABP?R?mC/EBPαGCGGACAAATCTCAGATTAAAGGAGGAG
1.2.4 轉(zhuǎn)錄因子對(duì)雞L-FABP基因啟動(dòng)子活性影響 HEGP2細(xì)胞接種于12孔板中,待細(xì)胞生長(zhǎng)至70%匯合時(shí),將C/EBPα真核表達(dá)載體分別與雞pGL3-L-FABP(-2 076/-20)和突變重組體pGL3-L-FABP-mC/EBPα啟動(dòng)子報(bào)告基因載體共轉(zhuǎn)染HEGP2細(xì)胞作為試驗(yàn)組;pCMV-HA載體分別與雞pGL3-L-FABP(-2 076/-20)和突變重組體pGL3-L-FABP-mC/EBPα啟動(dòng)子報(bào)告基因載體共轉(zhuǎn)染HEGP2細(xì)胞作為對(duì)照組。海腎熒光素酶報(bào)告基因?yàn)閮?nèi)源參照。每孔細(xì)胞轉(zhuǎn)染1 μg質(zhì)粒(表達(dá)載體∶啟動(dòng)子報(bào)告基載體質(zhì)量比為3∶2),0.01 μg的海腎對(duì)照質(zhì)粒(PRL-PK)轉(zhuǎn)染48 h,回收細(xì)胞,檢測(cè)雙報(bào)告基因熒光素酶活性。
1.2.5 數(shù)據(jù)分析 所有數(shù)據(jù)均為3次獨(dú)立試驗(yàn)結(jié)果,采用SPSS13.0統(tǒng)計(jì)軟件進(jìn)行單因素方差分析與t檢驗(yàn)。P<0.05為差異顯著,P<0.01差異極顯著。
2.1L-FABP啟動(dòng)子區(qū)域的C/EBPα結(jié)合位點(diǎn)分析
利用Mulan(http://mulan.dcode.org)和TFSEARCH(http://www.cbrc.jp/research/db/TFSEARCH.html)網(wǎng)站分析雞L-FABP(-2 076/-20)啟動(dòng)子序列上轉(zhuǎn)錄因子C/EBPα結(jié)合位點(diǎn),設(shè)置Threshold:85.0 point。結(jié)果發(fā)現(xiàn),在雞L-FABP(-2 076/-20)啟動(dòng)子序列區(qū)間存在1個(gè)C/EBPα結(jié)合位點(diǎn)。結(jié)合在L-FABP翻譯起始位點(diǎn)上游-1 854/-1 841,結(jié)合序列為agatttgtcAAtat。兩個(gè)軟件預(yù)測(cè)結(jié)果一致。
2.2 定點(diǎn)突變重組體的構(gòu)建與鑒定
以L-FABP基因啟動(dòng)子(-2 076/-20)質(zhì)粒為模板,利用L-FABP-F-mC/EBPα:5′-CTGAGA-TTTGTCCGCATGCTCCCAATTG-3′,L-FABP-R-mC/EBPα:5′-GCGGACAAATCTCAGATTAA-AGGAGGAG-3′為引物,進(jìn)行PCR擴(kuò)增。得到一條約6 874 bp的特異性條帶(圖1),與預(yù)期的結(jié)果大小一致。菌液提交立菲公司進(jìn)行測(cè)序(圖2)。結(jié)果顯示L-FABP-mC/EBPα啟動(dòng)子點(diǎn)突變載體構(gòu)建成功。
2.3C/EBPα結(jié)合位點(diǎn)定點(diǎn)突變重組體的啟動(dòng)子活性分析
M.DNA相對(duì)分子質(zhì)量標(biāo)準(zhǔn);1.原質(zhì)粒為模板點(diǎn)突變PCR產(chǎn)物;2.模板稀釋10倍點(diǎn)突變PCR產(chǎn)物; 3.模板稀釋100倍點(diǎn)突變PCR產(chǎn)物;4.模板稀釋1 000倍點(diǎn)突變PCR產(chǎn)物M.Trans2K Plus П DNA marker(5 μL);1-4.PCR products of site-directed mutagenesis,plasmid as templates respectively diluted 10,100,1 000 times圖1 C/EBPα結(jié)合位點(diǎn)突變重組體質(zhì)粒的瓊脂糖凝膠電泳Fig.1 Agarose gel electrophoresis analysis of the C/EBPα binding sites mutant
為檢測(cè)C/EBPα結(jié)合位點(diǎn)的突變是否影響L-FABP啟動(dòng)子的活性,將L-FABP啟動(dòng)子突變體與C/EBPα表達(dá)質(zhì)粒共轉(zhuǎn)染HEPG2細(xì)胞。48 h后分別檢測(cè)螢火蟲熒光素酶和海腎熒光素酶的活性。結(jié)果表明:1)C/EBPα的外源過表達(dá)可以抑制野生型L-FABP的啟動(dòng)子活性(P=0.028 0)。2)突變L-FABP的啟動(dòng)子區(qū)C/EBPα結(jié)合位點(diǎn),C/EBPα外源過表達(dá)后L-FABP的啟動(dòng)子活性增強(qiáng)(P=0.019 2)。3)突變型L-FABP與野生型L-FABP相比突變型L-FABP的啟動(dòng)子活性高于野生型L-FABP啟動(dòng)子活性(P=0.003 5)。4)外源過表達(dá)C/EBPα,突變型L-FABP啟動(dòng)子活性高于野生型L-FABP啟動(dòng)子活性(P=0.002 2)(圖3)。這些結(jié)果說明,C/EBPα結(jié)合位點(diǎn)得到有效突變,也暗示了C/EBPα對(duì)L-FABP啟動(dòng)子活性的抑制效應(yīng)是通過該結(jié)合位點(diǎn)發(fā)揮作用的。
L-FABP基因?qū)?xì)胞內(nèi)脂肪酸的轉(zhuǎn)運(yùn)、代謝、脂質(zhì)合成及長(zhǎng)鏈脂肪酸依賴性基因的調(diào)控具有重要作用[10-11]。筆者前期通過對(duì)雞L-FABP多態(tài)性的研究發(fā)現(xiàn),L-FABP基因可能是影響雞脂肪性狀的重要候選基因[12]。利用生物信息學(xué)軟件對(duì)L-FABP的啟動(dòng)子區(qū)域進(jìn)行分析,發(fā)現(xiàn)L-FABP的啟動(dòng)子區(qū)域含有C/EBPα等轉(zhuǎn)錄因子結(jié)合位點(diǎn)[13]。雞L-FABP基因受到C/EBPα基因負(fù)調(diào)控作用,且突變L-FABP啟動(dòng)子區(qū)C/EBPα結(jié)合位點(diǎn)后失去對(duì)L-FABP啟動(dòng)子的抑制作用。
目前,大量研究證實(shí)C/EBPα蛋白對(duì)基因的轉(zhuǎn)錄調(diào)控是多層次多因子的復(fù)雜精細(xì)調(diào)控。其與多種蛋白因子相互協(xié)調(diào),在脂肪細(xì)胞增殖分化、脂肪沉積、胚胎發(fā)育、機(jī)體能量代謝、免疫反應(yīng)及多種疾病過程中發(fā)揮重要作用[14-16]。C/EBP基因序列在人和雞之間高度保守[8,17]。在不同物種間C/EBPs家族都是具有重要生物學(xué)作用的功能基因[18-19]。C/EBPα能與Ap2、SCD1、GluT4、leptin等脂肪細(xì)胞特征的啟動(dòng)子位點(diǎn)相結(jié)合并激活其表達(dá),而突變這些基因啟動(dòng)子區(qū)的C/EBPα結(jié)合位點(diǎn),則C/EBPα對(duì)其無激活效應(yīng)[20]。本研究的結(jié)果顯示,C/EBPα外源過表達(dá)可以抑制L-FABP啟動(dòng)子活性,與筆者前期研究結(jié)果一致[9]。采用定點(diǎn)突變方法將L-FABP啟動(dòng)子區(qū)域中C/EBPα結(jié)合位點(diǎn)進(jìn)行突變后,L-FABP的啟動(dòng)子活性明顯升高。L-FABP突變體啟動(dòng)子與C/EBPα共轉(zhuǎn)染至人肝癌細(xì)胞中,L-FABP突變體啟動(dòng)子活性顯著增強(qiáng)。通過生物信息學(xué)分析顯示雞L-FABP基因啟動(dòng)子區(qū)存在多個(gè)PPARγ結(jié)合位點(diǎn)。丁寧[21]研究顯示,雞C/EBPα基因表達(dá)蛋白能夠結(jié)合于PPARγ基因啟動(dòng)子區(qū),并顯著激活其轉(zhuǎn)錄。有報(bào)道顯示,adipophilin、L-FABP、RegIA、Gob-4 和NGAL這5個(gè)基因是由PPARγ直接調(diào)控的靶基因[22],此外激活的PPARγ可誘導(dǎo)L-FABP的表達(dá),從而有效地轉(zhuǎn)運(yùn)脂質(zhì)并促進(jìn)其代謝[23]。因此推測(cè),這有可能是轉(zhuǎn)染C/EBPα反而造成了L-FABP突變體啟動(dòng)子區(qū)域其它轉(zhuǎn)錄因子如PPARγ等的結(jié)合量相應(yīng)升高進(jìn)而促進(jìn)了L-FABP突變體啟動(dòng)子活性,但該推測(cè)還需進(jìn)一步研究驗(yàn)證。
下劃線標(biāo)示位置為預(yù)測(cè)C/EBPα結(jié)合序列,箭頭標(biāo)示位置為點(diǎn)突變位置,由AAT突變?yōu)镃GCUnderline indicate the predicted C/EBPα sequence,arrow label position for the point mutation,by the AAT mutated into CGC圖2 L-FABP啟動(dòng)子區(qū)點(diǎn)突變測(cè)序結(jié)果Fig.2 The sequencing of L-FABP promoter region site-directed mutagenesis
*表示差顯著(P<0.05);**表示差異極顯著(P<0.01)*.Means differ significantly(P<0.05);**.Means highly differ significantly(P<0.01)圖3 定點(diǎn)突變技術(shù)分析雞L-FABP基因啟動(dòng)子區(qū)C/EBPα結(jié)合位點(diǎn)對(duì)該基因轉(zhuǎn)錄調(diào)控的影響Fig.3 Mutation analysis of the function of C/EBPα binding site in the minimal L-FABP promoter region
L-FABP 是肝中唯一表達(dá)的脂肪酸結(jié)合蛋白,介導(dǎo)脂肪酸及多種疏水基團(tuán)的轉(zhuǎn)運(yùn)。本研究使用人肝癌細(xì)胞系HEPG2作為試驗(yàn)材料探索L-FABP轉(zhuǎn)錄調(diào)控機(jī)制。由于L-FABP基因及轉(zhuǎn)錄因子C/EBPα在雞和人肝中都有表達(dá)且L-FABP、C/EBPα基因氨基酸序列保守性很高,人肝組織中的環(huán)境與禽類肝所提供的環(huán)境相似,因此推測(cè)在人和雞的L-FABP基因具有相同的調(diào)控機(jī)制,雞L-FABP基因受到C/EBPα基因負(fù)調(diào)控作用,并且C/EBPα很可能通過與該位點(diǎn)結(jié)合參與L-FABP的轉(zhuǎn)錄調(diào)控。
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(編輯 郭云雁)
Site Directed Mutagenesis forC/EBPαBinding Sites in ChickenL-FABPPromoter
HE Qi1,2,3,SUN Ying-ning1,2,3,LI Hui1,2,3*,WANG Qi-gui1,2,4*
(1.KeyLaboratoryofChickenGeneticsandBreeding,MinistryofAgriculture,Harbin150030,China; 2.KeyLaboratoryofAnimalGenetics,BreedingandReproduction,EducationDepartmentofHeilongjiangProvince,Harbin150030,China;3.CollegeofAnimalScienceandTechnology,NortheastAgriculturalUniversity,Harbin150030,China;4.ChongqingAcademyofAnimalScience,Chongqing402460,China)
In order to further determine theC/EBPαbinding site ofL-FABPand analyze its role in the regulation ofL-FABPtranscription,theC/EBPαbinding site inL-FABPpromoter was effectively mutated using site-directed mutagenesis in the current study.The results showed that the expression ofL-FABPwas significantly repressed byC/EBPα,but theL-FABPpromoter activity was significantly promoted after the mutation ofC/EBPαbinding site.In a conclusion,the expression ofL-FABPwas significantly repressed byC/EBPα,andC/EBPαprobably involved in the regulation ofL-FABPexpression through this binding site.These results will provide a foundation for further research on the regulatory mechanism and function of chickenC/EBPαonL-FABPgene.
chicken;L-FABPgene;promoter;site-directed mutagenesis;C/EBPαgene
10.11843/j.issn.0366-6964.2015.09.003
2014-11-21
國(guó)家自然科學(xué)基金(30972087);博士后研究人員落戶黑龍江科研啟動(dòng)資助金(LBH-Q08131);重慶市現(xiàn)代農(nóng)業(yè)人才培育工程(14401)
賀 綦(1988-),女,黑龍江哈爾濱人,碩士生,主要從事動(dòng)物遺傳育種與繁殖研究,E-mail:heqidongke@163.com
*通信作者:李 輝,博士,教授,主要從事動(dòng)物遺傳育種研究,E-mail:lihui@neau.edu.cn;王啟貴,博士,教授,主要從事動(dòng)物遺傳育種研究,E-mail:wangqigui@hotmail.com
S831.2
A
0366-6964(2015)09-1496-06