G多態(tài)性對(duì)中國(guó)荷斯坦牛泌乳性狀的影響。[方法]對(duì)866頭中國(guó)荷斯坦牛FADS2基因c.1571 A>G位點(diǎn)進(jìn)行多態(tài)性分析,采用最小二乘法分析其對(duì)泌乳性狀的影響。[結(jié)果]FADS2 c.1571 A>G 對(duì)日產(chǎn)奶量、乳蛋白率、乳脂率、總固形物以及尿素氮含量等泌乳性狀有顯著影響(PG突變對(duì)體細(xì)胞評(píng)分(SCS)無顯著影響(P>0.05)。[結(jié)論]FADS2可作為優(yōu)化中國(guó)荷斯坦牛泌乳性能的潛在分子標(biāo)記。關(guān)鍵詞 FADS2;c.15"/>
王夢(mèng)琦 倪煒 唐程
摘要 [目的]探索FADS2基因 c.1571 A>G多態(tài)性對(duì)中國(guó)荷斯坦牛泌乳性狀的影響。[方法]對(duì)866頭中國(guó)荷斯坦牛FADS2基因c.1571 A>G位點(diǎn)進(jìn)行多態(tài)性分析,采用最小二乘法分析其對(duì)泌乳性狀的影響。[結(jié)果]FADS2 c.1571 A>G 對(duì)日產(chǎn)奶量、乳蛋白率、乳脂率、總固形物以及尿素氮含量等泌乳性狀有顯著影響(P<0.05)。GG基因型個(gè)體具有較高的日產(chǎn)奶量,而AA型個(gè)體的乳脂率、乳蛋白率及總固形物含量顯著高于其他基因型個(gè)體。 FADS2 c.1571 A>G突變對(duì)體細(xì)胞評(píng)分(SCS)無顯著影響(P>0.05)。[結(jié)論]FADS2可作為優(yōu)化中國(guó)荷斯坦牛泌乳性能的潛在分子標(biāo)記。
關(guān)鍵詞 FADS2;c.1571 A>G;體細(xì)胞評(píng)分;泌乳性狀
中圖分類號(hào) S813.1文獻(xiàn)標(biāo)識(shí)碼 A
文章編號(hào) 0517-6611(2019)10-0092-02
Abstract [Objective]To explore the effects of c.1571 A>G polymorphism of FADS2 gene on the lactation traits of Chinese Holstein cows.[Method] The single nucleotide polymorphisms (SNPs) of c.1571 A>G mutation of FADS2 gene in Chinese Holstein cows (n=866) were analyzed,and their effects on the lactation traits of Chinese Holstein cows were analyzed by using least square method.[Result] c.1571 A>G mutation of FADS2 gene had significant effects on daily milk yield,milk protein content,milk fat content,total solids and urea nitrogen content,and other milk production traits (P<0.05). The individuals with GG genotype had significantly higher daily milk yield,while the individuals with AA genotype had significantly higher milk fat content,milk protein content and content of total solids.FADS2 c.1571 A>G mutation had no significant effect on SCS.[Conclusion] FADS2 could be used as the potential molecular markers for improving the? lactation performance of Chinese Holstein cows.
Key words FADS2;c.1571 A>G mutation;Somatic cell score(SCS);Lactation traits
泌乳性狀是奶牛長(zhǎng)期選擇育種所依據(jù)的主要經(jīng)濟(jì)性狀,如日產(chǎn)奶量、乳脂率、乳蛋白率、乳糖含量、總固形物和乳中尿素氮等[1]。經(jīng)濟(jì)性狀通常受多基因的調(diào)控,因此探索對(duì)這些性狀有較大影響的基因尤為重要[2]。然而,目前只發(fā)現(xiàn)少數(shù)的突變與牛奶組成相關(guān)[3]。
脂肪酸去飽和酶(fatty acid desaturases,F(xiàn)ADS)是脫氫酶家族的成員,通過脫氫作用在脂肪酸鏈特定位置上催化C-C 轉(zhuǎn)換成C=C[4],對(duì)脂肪酸向多不飽和脂肪酸的轉(zhuǎn)化起催化作用。FADS1和FADS2基因調(diào)控多不飽和脂肪酸代謝路徑并影響血漿中的多不飽和脂肪酸含量[5]。Matsumoto等[6]發(fā)現(xiàn)FADS2 g.-823G>A 對(duì)牛肉品質(zhì)評(píng)分有顯著影響。IbeaghaAwemu 等[7]報(bào)道了加拿大荷斯坦牛FADS2基因的33個(gè)SNPs,并發(fā)現(xiàn)FADS2基因3 非轉(zhuǎn)錄區(qū)域(3 untranscript region,3UTR)c.1571 A>G 和 c.2776 A>G 與牛奶中多不飽和脂肪酸含量顯著相關(guān)。 Fatima等[8]報(bào)道產(chǎn)后奶牛處于能量負(fù)平衡時(shí)FADS2基因表達(dá)下調(diào)。以上研究表明FADS2與泌乳性狀有潛在影響,但FADS2與泌乳性狀(如產(chǎn)奶量、乳脂率以及乳蛋白率等)的關(guān)系并不確定。筆者探討了FADS2基因c.1571 A>G突變對(duì)中國(guó)荷斯坦牛泌乳性狀的潛在影響。
1 材料與方法
1.1 試驗(yàn)動(dòng)物與泌乳性狀收集
從江蘇省某大型荷斯坦牛奶牛場(chǎng)采集866頭中國(guó)荷斯坦泌乳奶牛血液樣本,用于提取DNA。同時(shí),采集2013年6月至2016年12月DHI生產(chǎn)記錄,共來自866頭奶牛2 198個(gè)泌乳周期的20 532條測(cè)定日生產(chǎn)記錄用于表性分析,性狀主要包括日產(chǎn)奶量、乳脂率、乳蛋白率、脂蛋白比、體細(xì)胞數(shù)、SCS、乳糖、總固體和尿素氮。
1.2 DNA 提取、SNP 分型以及miRNA 結(jié)合位點(diǎn)預(yù)測(cè)
采用標(biāo)準(zhǔn)的苯酚-氯仿法從中國(guó)荷斯坦牛血液中提取DNA[9]。根據(jù)FADS2基因序列(BC123735.1),采用飛行時(shí)間質(zhì)譜法檢測(cè)FADS2基因3UTR區(qū)c.1571 A>G SNP突變。使用Target Scan7.0軟件預(yù)測(cè)變異位點(diǎn)結(jié)合的miRNA。
[4] MANGRAVITE L M,DAWSON K,DAVIS R R,et al.Fatty acid desaturase regulation in adipose tissue by dietary composition is independent of weight loss and is correlated with the plasma triacylglycerol response[J].The American journal of clinical nutrition,2007,86(3):759-767.
[5] MERINO D M,MA D W L,MUTCH D M.Genetic variation in lipid desaturases and its impact on the development of human disease[J].Lipids in health and disease,2010,9(1):1-14.
[6] MATSUMOTO H,NOGI T,TABUCHI I,et al.The SNPs in the promoter regions of the bovine FADS2 and FABP4 genes are associated with beef quality traits[J].Livestock science,2014,163:34-40.
[7] IBEAGHAAWEMU E M,AKWANJI K A,BEAUDOIN F,et al.Associations between variants of FADS genes and omega3 and omega6 milk fatty acids of Canadian Holstein cows[J].BMC Genetics,2014,15(1):1-9.
[8] FATIMA A,WATERS S,O′BOYLE P,et al.Alterations in hepatic miRNA expression during negative energy balance in postpartum dairy cattle[J].BMC Genomics,2014,15(1):1-10.
[9] WINFREY M R,ROTT M A,WORTMAN A T.UnraVeling DNA:Molecular biology for the laboratory[M].New York: PrenticeHal,199.
[10] SHI Y Y,HE L.SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci[J].Cell research,2005,15(2):97-98.
[11] LAROCHELLE J R,F(xiàn)ODOR M,XU X,et al.Structural and functional consequences of three cancerassociated mutations of the oncogenic phosphatase SHP2[J].Biochemistry,2016,55(15):2269-2277.
[12] DANDREA S,GUILLOU H,JAN S,et al.The same rat Δ6desaturase not only acts on 18but also on 24carbon fatty acids in verylongchain polyunsaturated fatty acid biosynthesis[J].Biochemical journal,2002,364(1):49-55.
[13] GRECO L,NETO J T N,PEDRICO A,et al.Effects of altering the ratio of dietary n6 to n3 fatty acids on performance and inflammatory responses to a lipopolysaccharide challenge in lactating Holstein cows[J].Journal of dairy science,2015,98(1):602-617.
[14] YOUNGERMAN S,SAXTON A M,OLIVER S P,et al.Association of CXCR2 polymorphisms with subclinical and clinical mastitis in dairy cattle[J].Journal of dairy science,2004,87(8):2442-2448.